Kavanaugh,
M. T., Oliver, M. J., Chavez, F. P., Letelier, R. M., Muller-Karger, F. E.
& Doney, S. C. (2016) Seascapes as a new vernacular for pelagic ocean
monitoring, management and conservation. ICES Journal of Marine Science.
Kroeker,
K. J., Sanford, E., Rose, J. M., Blanchette, C. A., Chan, F., Chavez, F. P.,
Gaylord, B., Helmuth, B., Hill, T. M., Hofmann, G. E., McManus, M. A., Menge,
B. A., Nielsen, K. J., Raimondi, P. T., Russell, A. D. & Washburn, L.
(2016) Interacting environmental mosaics drive geographic variation in mussel
performance and species interactions. Ecology Letters.
Radenac,
M.-H., Léger, F., Messié, M., Dutrieux, P., Menkes, C. & Eldin, G. (2016)
Wind-driven changes of surface current, temperature, and chlorophyll observed
by satellites north of New Guinea. Journal Geophysical Research: Oceans, 121),
2231-2252.
Aylward,
F. O., Eppley, J. M., Smith, J. M., Chavez, F. P., Scholin, C. A. & DeLong,
E. F. (2015) Microbial community transcriptional networks are conserved in
three domains at ocean basin scales. Proceedings of the National Academy of
Sciences.
Carolan,
M., Smith, J. M. & Beman, J. M. (2015) Transcriptomic evidence for
microbial sulfur cycling in the eastern tropical North Pacific oxygen minimum
zone. Front Microbiol.
Hughes,
B. B., Levey, M. D., Fountain, M. C., Carlisle, A. B., Chavez, F. P. &
Gleason, M. G. (2015) Climate mediates threats to fish diversity and nursery
function at the land-sea interface. Proceedings of the National Academy of
Sciences USA. , 112(8025-8030.
Messié,
M. & Chavez, F. P. (2015) Seasonal regulation of primary production in
eastern boundary upwelling systems. Progress in Oceanography, 134(0), 1-18.
Miljutin,
D., Miljutina, M. & Messié, M. (2015) Changes in abundance and community
structure of nematodes from the abyssal polymetallic nodule field, Tropical
Northeast Pacific. Deep-Sea Research Part I: Oceanographic Research Papers,
106(126-135.
Orsi,
W. D., Smith, J. M., Wilcox, H. M., Swalwell, J. E., Carini, P., Worden, A. Z.
& Santoro, A. E. (2015) Ecophysiology of uncultivated marine euryarchaea is
linked to particulate organic matter. ISME J.
Pearse,
J. S., Doyle, W. T., Pearce, V. B., Gowing, M. M., Pennington, J. T., Danner,
E. & Wasser, A. (2015) Long-term Monitoring of Surfgrass Meadows in the
Monterey Bay National Marine Sanctuary: Recovery followed by Stability after
the Termination of a Domestic Sewage Discharge. Report for ONMS.
Pennington,
J. T., Blum, M. & Chavez, F. P. (2015) Seawater sampling by an autonomous
underwater vehicle: “Gulper” sample validation for nitrate, chlorophyll,
phytoplankton, and primary production. Limnology and Oceanography: Methods.
Sevadjian,
J. C., McPhee-Shaw, E. E., Raanan, B. Y., Cheriton, O. M. & Storlazzi, C.
D. (2015) Vertical convergence of resuspended sediment and subducted
phytoplankton to a persistent detached layer over the southern shelf of
Monterey Bay, California. Journal of Geophysical Research: Oceans, 120(5),
3462-3483.
Smith,
J. M., Damashek, J., Chavez, F. P. & Francis, C. A. (2015) Factors
influencing nitrification rates and the abundance and transcriptional activity
of ammonia-oxidizing microorganisms in the dark northeast Pacific Ocean.
Limnology and Oceanography.
Smith
Jr., K. L., Messié, M., Sherman, A. D., Huffard, C. L., Hobson, B. W., Ruhl, H.
A. & Boetius, A. (2015) Navigating the uncertain future of global oceanic
time series. EOS, 96).
Sudek,
S., Everroad, R. C., Gehman, A. M., Smith, J. M., Poirier, C. L., Chavez, F. P.
& Worden, A. Z. (2015) Cyanobacterial distributions along a
physico-chemical gradient in the northeastern Pacific Ocean. Environmental
Microbiology.
Xu,
Y., Rose, K. A., Chai, F., Chavez, F. P. & Ayon, P. (2015) Does spatial
variation in environmental conditions affect recruitment? A study using a 3-D
model of Peruvian anchovy. Progress in Oceanography.
Berdalet,
E., McManus, M. A., Ross, O. N., Burchard, H., Chavez, F. P., Jaffe, J. S.,
Jenkinson, I. R., Kudela, R., Lips, I., Lips, U., Lucas, A., Rivas, D., Ruiz-de
la Torre, M. C., Ryan, J., Sullivan, J. M. & Yamazaki, H. (2014)
Understanding harmful algae in stratified systems: Review of progress and
future directions. Deep Sea Research Part II: Topical Studies in Oceanography,
101(0), 4-20.
Chavez,
F. P., Hobday, A. J., Strutton, P., Gierach, M., Radenac, M.-H., Chai, F.,
Lehodey, P., Evans, K. & Guevara, R. (2014) The tropical Pacific in
relation to biological productivity and living resources. Intergovernmental
Oceanographic Commission. UNESCO.
Doney,
S., Rosenburg, A., Alexander, M., Chavez, F., Harvell, C. D., Hoffman, G.,
Orback, M. & Rucklehaus, M. (2014) Oceans and Marine Resources, in: J. M.
Melillo, T. T. C. Richmond & G. W. Yohe (Eds) Climate Change Impacts in the
United States: The Third National Climate Assessment 557-578.
Fiechter,
J., Curchitser, E. N., Edwards, C. A., Chai, F., Goebel, N. L. & Chavez, F.
P. (2014) Air-sea CO2 fluxes in the California Current: Impacts of model
resolution and coastal topography. Global Biogeochemical Cycles, 28(4),
2013GB004683.
Guo,
L., Chai, F., Xiu, P., Xue, H., Rao, S., Liu, Y. & Chavez, F. P. (2014)
Seasonal dynamics of physical and biological processes in the central
California Current System: A modeling study. Ocean Dynamics, 64(8), 1137-1152.
Ho,
D., Engel, V., Ferron, S., Friederich, G., Barr, J. & Wanninkhof, R. (2014)
Carbon cycling in a mangrove-dominated estuary of Everglades National Park,
Florida, USA. EGU General Assembly 2014. 16 ed. Vienna, Austria, Copernicus.
Lin,
G., Chai, F., Xiu, P., Liu, Y., Rao, S. & Chavez, F. P. (2014) Seasonal
dynamics of physical and biological processes in the central California Current
System: A modeling study. Ocean Dynamics.
McCann,
M., Schramm, R., Cline, D., Michisaki, R., Harvey, J. & Ryan, J. (2014)
Using STOQS (The spatial temporal oceanographic query system) to manage,
visualize, and understand AUV, glider, and mooring data. Autonomous Underwater
Vehicles (AUV), 2014 IEEE/OES.
Muller-Karger,
F. E., Kavanaugh, M. T., Montes, E., Balch, W. M., Breitbart, M., Chavez, F.
P., Doney, S. C., Johns, E. M., Letelier, R. M., Lomas, M. W., Sosik, H. M.
& White, A. E. (2014) A framework for a marine biodiversity observing
network within changing continental shelf seascapes. Oceanography, 27(2)(18–23.
Ryan,
J. P., McManus, M. A., Kudela, R. M., Lara Artigas, M., Bellingham, J. G.,
Chavez, F. P., Doucette, G., Foley, D., Godin, M., Harvey, J. B. J., Marin III,
R., Messié, M., Mikulski, C., Pennington, T., Py, F., Rajan, K., Shulman, I.,
Wang, Z. & Zhang, Y. (2014) Boundary influences on HAB phytoplankton
ecology in a stratification-enhanced upwelling shadow. Deep Sea Research Part
II: Topical Studies in Oceanography, 101(0), 63-79.
Sevadjian,
J. C., McManus, M. A., Ryan, J., Greer, A. T., Cowen, R. K. & Woodson, C.
B. (2014) Across-shore variability in plankton layering and abundance
associated with physical forcing in Monterey Bay, California. Continental Shelf
Research, 72(0), 138-151.
Smith,
J. M., Casciotti, K. L., Chavez, F. P. & Francis, C. A. (2014) Differential
contributions of archaeal ammonia oxidizer ecotypes to nitrification in coastal
surface waters. ISME J, 8(8), 1704-1714.
Smith,
J. M., Chavez, F. P. & Francis, C. A. (2014) Ammonium Uptake by
Phytoplankton Regulates Nitrification in the Sunlit Ocean. PLOS One,
9(9):e108173(
Smith,
J. M., Mosier, A. C. & Francis, C. A. (2014) Spatiotemporal Relationships
Between the Abundance, Distribution, and Potential Activities of
Ammonia-Oxidizing and Denitrifying Microorganisms in Intertidal Sediments.
Microbial Ecology, 69(1), 13-24.
Sutton,
A. J., Feely, R. A., Sabine, C. L., McPhaden, M. J., Takahashi, T., Chavez, F.
P., Friederich, G. E. & Mathis, J. T. (2014) Natural variability and
anthropogenic change in equatorial Pacific surface ocean pCO2 and pH. Global
Biogeochemical Cycles, 28(2), 2013GB004679.
Timmerman,
A. H. V., McManus, M. A., Cheriton, O. M., Cowen, R. K., Greer, A. T., Kudela,
R. M., Ruttenberg, K. & Sevadjian, J. (2014) Hidden thin layers of toxic
diatoms in a coastal bay. Deep Sea Research Part II: Topical Studies in
Oceanography, 101(0), 129-140.
Bjorkstedt,
E. P., Goericke, R., McClatchie, S., Weber, E., Watson, W., Lo, N., Peterson,
W. T., Brodeur, R. D., Auth, T., Fisher, J., Morgan, C., Peterson, J., Largier,
J., Bograd, S. J., Durazo, R., Gaxiola-Castro, G., Lavaniegos, B., Chavez, F.
P., Collins, C. A., Hannah, B., Field, J., Sakuma, K., Satterthwaite, W.,
O'Farrell, M., Hayes, S., Harding, J., Sydeman, W. J., Thompson, S. A.,
Warzybok, P., Bradley, R., Jahncke, J., Golightly, R. T., Schneider, S. R.,
Suryan, R. M., Gladics, A. J., Horton, C. A., Kim, S. Y., Melin, S. R., DeLong,
R. L. & Abell, J. (2013) State Of The California Current 2011-2012:
Ecosystems Respond To Local Forcing As La Nina Wavers And Wanes. California
Cooperative Oceanic Fisheries Investigations Reports, 53(41-76.
De
Brabandere, L., Canfield, D. E., Dalsgaard, T., Friederich, G. E., Revsbech, N.
P., Ulloa, O. & Thamdrup, B. (2013) Vertical partitioning of nitrogen-loss
processes across the oxic-anoxic interface of an oceanic oxygen minimum zone.
Environmental Microbiology.
Fishman,
J., Iraci, L. T., Al-Saadi, J., Chance, K., Chavez, F., Chin, M., Coble, P.,
Davis, C., DiGiacomo, P. M., Edwards, D., Eldering, A., Goes, J., Herman, J.,
Hu, C., Jacob, D. J., Jordan, C., Kawa, S. R., Key, R., Liu, X., Lohrenz, S.,
Mannino, A., Natraj, V., Neil, D., Neu, J., Newchurch, M., Pickering, K.,
Salisbury, J., Sosik, H., Subramaniam, A., Tzortziou, M., Wang, J. & Wang,
M. (2013) The United States' Next Generation Of Atmospheric Composition And
Coastal Ecosystem Measurements NASA's Geostationary Coastal And Air Pollution
Events (GEO-CAPE) Mission. Bulletin of the American Meteorological Society,
93(10), 1547-+.
Gierach,
M. M., Messié, M., Lee, T., Karnauskas, K. B. & Radenac, M.-H. (2013)
Biophysical responses near equatorial islands in the Western Pacific Ocean
during El Niño/La Niña transitions. Geophysical Research Letters, 40(20),
2013GL057828.
Gomes,
K., Cline, D., Edgington, D., Godin, M., Maughan, T., McCann, M., O'Reilly, T.,
Bahr, F., Chavez, F., Messié, M., Das, J. & Rajan, K. (2013) ODSS: A
Decision Support System for Ocean Exploration. 29th IEEE International
Conference on Data Engineering (ICDE). Brisbane, Australia, IEEE.
Greer,
A. T., Cowen, R. K., Guigand, C. M., McManus, M. A., Sevadjian, J. C. &
Timmerman, A. H. V. (2013) Relationships between phytoplankton thin layers and
the fine-scale vertical distributions of two trophic levels of zooplankton.
Journal of Plankton Research, 35(5), 939-956.
Messié,
M. & Chavez, F. P. (2013) Physical-biological synchrony in the global ocean
associated with recent variability in the central and western equatorial
Pacific. Journal of Geophysical Research, 118(8), 3782-3794.
Ottesen,
E. A., Young, C. R., Eppley, J. M., Ryan, J. P., Chavez, F. P., Scholin, C. A.
& DeLong, E. F. (2013) Pattern and synchrony of gene expression among
sympatric marine microbial populations. Proceedings of the National Academy of
Sciences of the United States of America, 110(6), E488-E497.
Radenac,
M.-H., Messié, M., Leger, F. & Bosc, C. (2013) A very oligotrophic zone
observed from space in the equatorial Pacific warm pool. Remote Sensing of
Environment, 134(224-233.
Ryan,
J. P., McManus, M. A., Kudela, R. M., Lara Artigas, M., Bellingham, J. G.,
Chavez, F. P., Doucette, G., Foley, D., Godin, M., Harvey, J. B. J., Marin III,
R., Messié, M., Mikulski, C., Pennington, J. T., Py, F., Rajan, K., Shulman,
I., Wang, Z. & Zhang, Y. (2013) Boundary influences on phytoplankton
ecology in a stratification-enhanced upwelling shadow. Deep-Sea Research Part
II, 101), 63-79.
Santora,
J. A., Sydeman, W. J., Messié, M., Chai, F., Chao, Y., Thompson, S. A., Wells,
B. K. & Chavez, F. P. (2013) Triple check: Observations verify structural
realism of an ocean ecosystem model. Geophysical Research Letters, 40(7).
Tugrul,
S., Murray, J. W., Friederich, G. E. & Salihoglu, I. (2013) Spatial and
temporal variability in the chemical properties of the oxic and suboxic layers
of the Black Sea. Journal of Marine Systems, 0).
Xu,
Y., Chai, F., Rose, A., Ñiquen , M. & Chavez, F. P. (2013) Environmental
influences on the interannual variation and spatial distribution of Peruvian
anchovy (Engraulis ringens) population dynamics from 1991 to 2007: a
three-dimensional modeling study. Ecological Modelling, . Global Climate Change
and Marine Ecosystems, 264(64-82.
Bertrand,
A., Chaigneau, A., Peraltilla, S., Ledesma, J., Graco, M., Monetti, F. &
Chavez, F. P. (2012) Oxygen: A Fundamental Property Regulating Pelagic
Ecosystem Structure in the Coastal Southeastern Tropical Pacific. Plos One,
6(12), 8.
Buitenhuis,
E. T., W. K. W. Li, D. Vaulot, M. W. Lomas, M. Landry, F. Partensky, D. M.
Karl, O. Ulloa, L. Campbell, S. Jacquet, F. Lantoine, F. Chavez, D. Macias, M.
Gosselin & McManus, G. B. (2012) Picophytoplankton biomass distribution in
the global ocean. Earth System Science Data Discussions, 5(221-242.
Chavez,
F. P. (2012) Climate change and marine ecosystems. Proceedings of the National
Academy of Sciences of the United States of America, 109(47), 19045-19046.
Das,
J., Py, F., Maughan, T., O'Reilly, T., Messié, M., Ryan, J., Sukhatme, G. S.
& Rajan, K. (2012) Coordinated sampling of dynamic oceanographic features
with underwater vehicles and drifters. International Journal of Robotics
Research, 31(626-646.
Frolov,
S., Ryan, J. P. & Chavez, F. P. (2012) Predicting euphotic-depth-integrated
chlorophyll-a from discrete-depth and satellite-observable chlorophyll-a off
central California. Journal of Geophysical Research-Oceans, 117(7.
Gomez,
F., Montecinos, A., Hormazabal, S., Cubillos, L. A., Correa-Ramirez, M. &
Chavez, F. P. (2012) Impact of spring upwelling variability off
southern-central Chile on common sardine (Strangomera bentincki) recruitment.
Fisheries Oceanography, no-no.
Hales,
B., Strutton, P. G., Saraceno, M., Letelier, R., Takahashi, T., Feely, R.,
Sabine, C. & Chavez, F. (2012) Satellite-based prediction of pCO2 in
coastal waters of the eastern North Pacific. Progress in Oceanography.
Jolliff,
J. K., Gould Jr., R. W., Penta, B., Teague, W. J., deRada, S., Chavez, F. P.
& Arnone, R. A. (2012) Water mass bio-optical properties in the Monterey
Bay region: Fluorescence-based inference of shifts in phytoplankton
photophysiology. Journal of Geophysical Research.
Messié,
M. & Chavez, F. P. (2012) A global analysis of ENSO synchrony: the oceans
biological response to physical forcing. Journal of Geophysical Research.
Paerl,
R. W., Turk, K. A., Beinart, R. A., Chavez, F. P. & Zehr, J. P. (2012)
Seasonal change in the abundance of Synechococcus and multiple distinct
phylotypes in Monterey Bay determined by rbcL and narB quantitative PCR.
Environmental Microbiology, 14(3), 580-593.
Pfeil,
B., Olsen, A., Bakker, D. C. E., Hankin, S., Koyuk, H., Kozyr, A., Malczyk, J.,
Manke, A., Metzl, N., Sabine, C. L., Akl, J., Alin, S. R., Bellerby, R. G. J.,
Borges, A., Boutin, J., Brown, P. J., Cai, W. J., Chavez, F. P., Chen, A.,
Cosca, C., Fassbender, A. J., Feely, R. A., González-Dávila, M., Goyet, C.,
Hardman-Mountford, N., Heinze, C., Hood, M., Hoppema, M., Hunt, C. W., Hydes,
D., Ishii, M., Johannessen, T., Jones, S. D., Key, R. M., Körtzinger, A.,
Landschützer, P., Lauvset, S. K., Lefèvre, N., Lenton, A., Lourantou, A.,
Merlivat, L., Midorikawa, T., Mintrop, L., Miyazaki, C., Murata, A., Nakadate,
A., Nakano, Y., Nakaoka, S., Nojiri, Y., Omar, A. M., Padin, X. A., Park, G.
H., Paterson, K., Perez, F. F., Pierrot, D., Poisson, A., Ríos, A. F.,
Santana-Casiano, J. M., Salisbury, J., Sarma, V. V. S. S., Schlitzer, R.,
Schneider, B., Schuster, U., Sieger, R., Skjelvan, I., Steinhoff, T., Suzuki,
T., Takahashi, T., Tedesco, K., Telszewski, M., Thomas, H., Tilbrook, B.,
Tjiputra, J., Vandemark, D., Veness, T., Wanninkhof, R., Watson, A. J., Weiss,
R., Wong, C. S. & Yoshikawa-Inoue, H. (2012) A uniform, quality controlled
Surface Ocean CO2 Atlas (SOCAT). Earth System Science Data Discussions,
Copernicus Publications, 5(2), 735-780.
Bjorkstedt.
E., Goericke, R., McClatchie, S., Chavez, F. P., Weber, E., Watson, W., Lo, N.,
Peterson, B., Emmett, B., Brodeur, R., Peterson, J., Litz, M., Gomez-Valdez,
J., Gaxiola-Castro, G., Lavaniegos, B., Collins, C. A., Field, J., Sakuma, K.,
Warzybok, P., Bradley, R., Jahncke, J., Bograd, S., Schwing, F., Campbell, G.
S., Hildebrand, J., Sydeman, W., Thompson, S. A., Largier, J., Halle, C., Kim,
S. Y. & Abell, J. (2011) State of the California Current 2010-2011.
Regionally variable responses to a strong (but fleeting?) La Niña. California
Cooperative Fisheries Investigation Reports, 52(36:68.
Castro,
C. G., Collins, C. A., Pennington, J. T., Zúñiga, D. & Chavez, F. P. (2011)
Spatial distribution and offshore export of total organic carbon along the
eastern boundary of the Subtropical North Pacific. Advances in Oceanography and
Limnology, 2(2), 93-106.
Chavez,
F. P., Messié, M. & Pennington, J. T. (2011) Marine primary production in
relation to climate variability and change. Annual Review of Marine Science,
3), 227-260.
Das,
J., Maughan, T., McCann, M., Godin, M., O’Reilly, T., Messié, M., Bahr, F.,
Gomes, K., Py, F., Bellingham, J., Sukhatme, G. S. & Rajan, K. (2011)
Towards mixed-initiative, multi-robot field experiments: design, deployment,
and lessons learned. International Conference on Intelligent Robots and Systems
(IROS). San Francisco, USA.
Gray,
S. E. C., DeGrandpre, M. D., Moore, T. S., Martz, T. R., Friederich, G. E.
& Johnson, K. S. (2011) Applications of in situ pH measurements for
inorganic carbon calculations. Marine Chemistry, 125(1-4), 82-90.
Messié,
M. & Chavez, F. (2011) Global Modes of Sea Surface Temperature Variability
in Relation to Regional Climate Indices. Journal of Climate, 24(16), 4314-4331.
Paerl,
R. W., Johnson, K. S., Welsh, R. M., Worden, A. Z., Chavez, F. P. & Zehr,
J. P. (2011) Differential distributions of Synechococcus subgroups across the
California current system. Frontiers in Microbiology 2), 1-22.
Bjorkstedt,
E. P., Goericke, R., McClatchie, S., Weber, E., Watson, W., Lo, N., Peterson,
B., Emmett, B., Peterson, J., Durazo, R., Gaxiola-Castro, G., Chavez, F.,
Pennington, J. T., Collins, C. A., Field, J., Ralston, S., Sakuma, K., Bograd,
S. J., Schwing, F. B., Xue, Y., Sydeman, W. J., Thompson, S. A., Santora, J.
A., Largier, J., Halle, C., Morgan, S., Kim, S. Y., Merkens, K. P. B.,
Hildebrand, J. A. & Munger, L. M. (2010) State of the California current
2009-2010: Regional variation persists through transition from La Niña to El
Niño (and back?). California Cooperative Oceanic Fisheries Investigations
Reports, 51(39-69.
Cuvelier,
M. L., Allen, A. E., Monier, A., McCrow, J. P., Messié, M., Tringe, S. G.,
Woyke, T., Welsh, R. M., Ishoey, T., Lee, J. H., Binder, B. J., DuPont, C. L.,
Latasa, M., Guigand, C., Buck, K. R., Hilton, J., Thiagarajan, M., Caler, E.,
Read, B., Lasken, R. S., Chavez, F. P. & Worden, A. Z. (2010) Targeted
metagenomics and ecology of globally important uncultured eukaryotic
phytoplankton. Proceedings of the National Academy of Sciences of the United
States of America, 107(33), 14679-14684.
Knepp,
T. N., Bottenheim, J., Carlsen, M., Carlson, D., Donohoue, D., Friederich, G.,
Matrai, P. A., Netcheva, S., Perovich, D. K., Santini, R., Shepson, P. B.,
Simpson, W., Valentic, T., Williams, C. & Wyss, P. J. (2010) Development of
an autonomous sea ice tethered buoy for the study of ocean-atmosphere-sea
ice-snow pack interactions: the O-buoy. Atmospheric Measurement Techniques,
3(1), 249-261.
Lester,
S. E., McLeod, K. L., Tallis, H., Ruckelshaus, M., Halpern, B. S., Levin, P.
S., Chavez, F. P., Pomeroy, C., McCay, B. J., Costello, C., Gaines, S. D.,
Mace, A. J., Barth, J. A., Fluharty, D. L. & Parrish, J. K. (2010) Science
in support of ecosystem-based management for the US West Coast and beyond.
Biological Conservation, 143(3), 576-587.
Pennington,
J. T., Castro, C. A., Collins, C. A., Evans, W. W. I., Friederich, G. E.,
Michisaki, R. P. & Chavez, F. P. (2010) A carbon budget for the northern
and central California coastal upwelling systemContinental Margins Task Team
The Synthesis Book.
Wankel,
S. D., Joye, S. B., Samarkin, V. A., Shah, S. R., Friederich, G.,
Melas-Kyriazi, J. & Girguis, P. R. (2010) New constraints on methane fluxes
and rates of anaerobic methane oxidation in a Gulf of Mexico brine pool via in
situ mass spectrometry. Deep-Sea Research Part II: Topical Studies in
Oceanography, 57(21-23), 2022-2029.
Chao,
Y. Z. L., J. Farrara, J. C. McWilliams, J. Bellingham, X. Capet, F. Chavez,
J-K. Choi, R. Davis, J. Doyle, D. Frantaoni, P. Li, P. Marchesiello, M. A.
Moline, J. Paduan, S. Ramp (2009) Development, implementation and evaluation of
a data-assimilative ocean forecasting system off the central California coast.
Deep-Sea Research II.
Chavez,
F. P., Mauriaca, C. & Jerez, C. A. (2009) Constitutive and regulated
expression vectors to construct polyphosphate deficient bacteria. BMC Research
Notes, 2(
Chavez,
F. P. & Messié, M. (2009) A comparison of Eastern Boundary Upwelling
Ecosystems. Progress in Oceanography, 83(1-4), 80-96.
Conaway,
C. H., Black, F. J., Gault-Ringold, M., Pennington, J. T., Chavez, F. P. &
Flegal, A. R. (2009) Dimethylmercury in coastal upwelling waters, Monterey Bay,
California. Environmental Science and Technology, 43(5), 1305-1309.
Evans,
W., Strutton, P. G. & Chavez, F. P. (2009) Impact of tropical instability
waves on nutrient and chlorophyll distributions in the equatorial Pacific.
Deep-Sea Research Part I: Oceanographic Research Papers, 56(2), 178-188.
Freon,
P. C. W., Chavez, F. P. (2009) Conjectures on the influence of climate change
on ocean ecosystems dominated by small pelagic fish, in: C. R. D. Checkley, J.
Alheit (Ed.) Predicted effects of climate change on SPACC systems. Cambridge,
Cambridge University Press), 312-343.
Gutiérrez,
D., A. Sifeddine, D. B. Field, L. Ortlieb, G. Vargas, F. Chávez, F.P. Velazco,
V. Ferreira, P. Tapia, R. Salvatteci, H. Boucher, M. C. Morales, J. Valdés,
J.-L. Reyss, A. Campusano, M. Boussafir, M. Mandeng-Yogo, M. García, T.
Baumgartner (2009) Rapid reorganization in ocean biogeochemistry off Peru
towards the end of the Little Ice Age. Biogeosciences.
Haley
Jr. P.J., P.F.J. Lermusiaux, A.R. Robinson, W.G. Leslie, O. Logoutov, G.
Cossarini, X.S. Liang, P. Moreno, S.R. Ramp, J.D. Doyle, J. Bellingham, F.
Chavez & Johnston, S. (2009) Forecasting and reanalysis in the Monterey
Bay/California Current region for the Autonomous Ocean Sampling Network-II
experiment. Deep-Sea Research II.
Johnston,
T. M. S., Cheriton, O. M., Pennington, J. T. & Chavez, F. P. (2009) Thin
phytoplankton layer formation at eddies, filaments, and fronts in a coastal
upwelling zone. Deep-Sea Research Part II: Topical Studies in Oceanography,
56(3-5), 246-259.
Leinweber,
A., Gruber, N., Frenzel, H., Friederich, G. E. & Chavez, F. P. (2009)
Diurnal carbon cycling in the surface ocean and lower atmosphere of Santa
Monica Bay, California. Geophysical Research Letters, 36(8).
Messié,
M., Ledesma, J., Kolber, D. D., Michisaki, R. P., Foley, D. G. & Chavez, F.
P. (2009) Potential new production estimates in four eastern boundary upwelling
ecosystems. Progress in Oceanography, 83(1-4), 151-158.
Pennington,
J. T., Castro, C.G., Collins, C.A., Evans, W.W. IV, Friederich, G.E.,
Michisaki, R.P., Chavez, F.P. (2009) The Northern and Central California
Coastal Upwelling System, in: K.-K. Liu (Ed.) Carbon and Nutrient Fluxes in
Continental Margins. (vol. 25)Berlin Heidelberg, Springer-Verlag ), 29-44.
Quinones,
R. A., M. H. Gutierrez, G. Daneri, D. Gutierrez A.,H. E. Gonzalez, F.P. Chavez
(2009) The Humboldt Current System, in: K.-K. Liu (Ed.) Carbon and Nutrient
Fluxes in Continental Margins. (vol. 25)Berlin Heidelberg, Springer-Verlag),
44-64.
Ramp,
S. R., Davis, R. E., Leonard, N. E., Shulman, I., Chao, Y., Robinson, A. R.,
Marsden, J., Lermusiaux, P. F. J., Fratantoni, D. M., Paduan, J. D., Chavez, F.
P., Bahr, F. L., Liang, S., Leslie, W. & Li, Z. (2009) Preparing to
predict: The Second Autonomous Ocean Sampling Network (AOSN-II) experiment in the
Monterey Bay. Deep-Sea Research Part II: Topical Studies in Oceanography,
56(3-5), 68-86.
Ryan,
J. P., Fischer, A. M., Kudela, R. M., Gower, J. F. R., King, S. A., Marin Iii,
R. & Chavez, F. P. (2009) Influences of upwelling and downwelling winds on
red tide bloom dynamics in Monterey Bay, California. Continental Shelf
Research, 29(5-6), 785-795.
Shadden,
S. C., Lekien, F., Paduan, J. D., Chavez, F. P. & Marsden, J. E. (2009) The
correlation between surface drifters and coherent structures based on high-frequency
radar data in Monterey Bay. Deep-Sea Research Part II: Topical Studies in
Oceanography, 56(3-5), 161-172.
Shulman,
I., C. Rowley, S. Anderson, S. DeRada, J. Kindle, P. Martin, J. Doyle, J.
Cummings, S. Ramp, F. Chavez, D. Fratantoni, R. Davis (2009) Impact of glider
data assimilation on the Monterey Bay model. Deep-Sea Research II.
Bertrand,
A., Gerlotto, F., Bertrand, S., Gutiérrez, M., Alza, L., Chipollini, A., Diaz,
E., Espinoza, P., Ledesma, L., Quesquén, R., Peraltilla, S., Chavez., F.P.
(2008) Schooling behaviour and environmental forcing in relation to anchoveta
distribution: an analysis across multiple spatial scales. Progress in
Oceanography, 79(264-277.
Bograd,
S. C. G. C., E. Di Lorenzo, D. M. Palacios, H. Bailey, W. Gilly, F P. Chavez (2008)
Oxygen declines and the shoaling of the hypoxic boundary in the California
Current. Geophysical Research Letters, 35(L12607.
Buck,
K. R., Chavez, F. P. & Davis, A. S. (2008) Minidiscus trioculatus, a small
diatom with a large presence in the upwelling systems of central California.
Nova Hedwigia, 133(1-6.
Carr,
S. D., Capet, X. J., McWilliams, J. C., Pennington, J. T. & Chavez, F. P.
(2008) The influence of diel vertical migration on zooplankton transport and
recruitment in an upwelling region: estimates from a coupled
behavioral-physical model. Fisheries Oceanography, 17(1), 1-15.
Chavez,
F. P., A. Bertrand, R. Guevara, P. Soler, J. Csirke (2008) The northern
Humboldt Current System: brief history, present status and a view towards the
future. . Progress in Oceanography, 79(95-105.
Field,
D. B., C. Lange, D. Cayan, F. Chavez, M. Dalton, P. Smith (2008) Sardines and
anchovies: Natural variations and fisheries in complex ocean environments, in:
E. S. J.B.J. Jackson (Ed.) Using the Past to Inform the Future: The Known,
Unknown, and Unknowable (KUU) Conference 2003. Chicago, Chicago University
Press).
Field,
D. B., T.R. Baumgartner, V. Ferreira, D. Gutierrez, H. Lozano-Montes, R.
Salvatteci, & Soutar, A. (2008)
Variability in small pelagic fishes from scales in marine sediments and other
historical records, in: D. M. Checkley, C. Roy, J. Alheit, Y. Oozeki (Ed.)
Climate Change and Small Pelagic Fish. Cambridge, Cambridge University Press),
Chapter 4.
Finney,
B., J. Alheit, K.-C. Emeis, D.B. Field, D. Gutierrez & Struck, U. (2008)
Paleoecological Studies on Variability
in Marine Fish Populations: A Long-Term Perspective on the Impacts of Climatic
Change on Marine Fisheries. Progress in Oceanography.
Friederich,
G. E., J. Ledesma, O. Ulloa, F.P. Chavez (2008) Air-Sea carbon dioxide fluxes
in the coastal southeastern tropical Pacific. Progress in Oceanography,
79(156-166.
Messié,
M., R. Calienes, J. Ledesma, R.T. Barber, J.T. Pennington and F.P. Chavez
(2008) Interannual variability and long term trends in eastern Pacific
upwelling ecosystems. IN Presentation (Ed.) Ocean Sciences. Mar 2008, Orlando,
Florida.
Messié,
M., J. Ledesma, D. Kolber, F.P. Chavez (2008) Nitrate supply and potential
primary productivity estimates in four eastern boundary upwelling systems. IN
Presentation (Ed.) Eastern boundary upwelling ecosystems. June 2008, Las
Palmas, Spain.
Messié,
M., R. Calienes, J. Ledesma, R.T. Barber, J.T. Pennington, F.P. Chavez (2008)
Physical/biological variability and interactions at the decadal scale in
eastern Pacific upwelling ecosystems. IN Poster (Ed.) CLIMECO Workshop. April
2008, Brest, France.
Ohman,
M. D., G.E. Durbin, J. Runge, B.K. Sullivan, D.B. Field (2008) Relationship of
predation potential to mortality of Calanus finmarchicus on Georges Bank,
northwest Atlantic. Limnology and Oceanography, 53(4), 1643-1655.
Rienecker,
E. (2008) Intermediate Nepheloid Layers in the Central California Coastal Zone.
IN Presentation (Ed.) Eastern boundary upwelling ecosystems. June 2008, Las
Palmas, Spain.
Rienecker,
E., J. Ryan, M. Blum, C. Dietz, L. Coletti, R. Marin III, W. P. Bissett (2008)
Mapping phytoplankton in-situ using a laser scattering sensor. Limnology and
Oceanography, Methods, 6(153-161.
Ryan,
J. P., J. F. R. Gower, S. A. King, W. P. Bissett, A. M. Fischer, R. M. Kudela,
Z. Kolber, F. Mazzillo, E. V. Rienecker, F. P. Chavez (2008) A coastal ocean
extreme bloom incubator. Geophysical Research Letters, 35(L12602.
Ryan,
J. P., McManus, M. A., Paduan, J. D. & Chavez, F. P. (2008) Phytoplankton
thin layers caused by shear in frontal zones of a coastal upwelling system.
Marine Ecology-Progress Series, 354(21-34.
Saba,
V. S., Spotila, J. R., Chavez, F. P. & Musick, J. A. (2008) Bottom-up and
climatic forcing on the worldwide population of leatherback turtles. Ecology,
89(5), 1414-1427.
Sifeddine,
A., D. Gutierrez, L. Ortlieb, H. Boucher, F. Velazco, D.B. Field, G. Vargas,
M. Boussafir, R. Salvatteci, V.
Ferreira, M. García, J. Valdes, S. Caquineau, M. Mandeng Yogo, F. Cetin, J. Solis, P. Soler, T. Baumgartner
(2008) Changes in terrestrial runoff, water mass oxygenation and upwelling
productivity recorded in laminated sediments off the Central Peruvian Coast
spanning the last centuries. Progress in Oceanography.
Strutton,
P. G., Evans, W. & Chavez, F. P. (2008) Equatorial Pacific chemical and
biological variability, 1997-2003. Global Biogeochemical Cycles, 22(2).
Takahashi,
T. S. C. S., R. Wanninkhof, C. Sweeney, R. A. Feely, D. W. Chipman, B. Hales,
G. Friederich, F. P. Chavez, C. Sabine, A. Watson, D. C. E. Bakker, U.
Schuster, N. Metzl, H. Yoshikawa-Inoue, Masao Ishii, T. Midorikawa, Y. Nojiri,
A. Körtzinger, T. Steinhoff, M. Hoppema, J. Olafsson, T. S. Arnarson, B.
Tilbrook, T. Johannessen, A. Olsen, R. Bellerby, C. S. Wong, Bruno Delille, N.
R. Bates, H. J. W. de Baar (2008) Climatological Mean and Decadal Change in
Surface Ocean pCO2, and Net Sea-air CO2 Flux over the Global Oceans. Deep-Sea
Research II.
Chai,
F., Jiang, M. S., Chao, Y., Dugdale, R. C., Chavez, F. & Barber, R. T.
(2007) Modeling responses of diatom productivity and biogenic silica export to
iron enrichment in the equatorial Pacific Ocean. Global Biogeochemical Cycles,
21(3).
Chavez,
F. P. (2007) Variability, Multidecadal, in: M. W. Denny, Gaines, S. D. (Ed.) Encyclopedia of Tidepools &
Rocky Shores. Berkeley, University of California Press), 608-611.
Chavez,
F. P., Takahashi, T., Cai, W.-J., Friederich, G., Hales, B., Wanninkhof, R.
& Feely, R. A. (2007) Coastal Oceans, in: A. W. King, L. Dilling, G. P.
Zimmerman, D. M. Fairman, R. A. Houghton, G. Marland, A. Z. Rose & T. J.
Wilbanks (Eds) The First State of the Carbon Cycle Report (SOCCR): The North
American Carbon Budget and Implications for the Global Carbon Cycle. National Climatic Data Center, Asheville, NC,
USA,, A Report by the U.S. Climate Change Science Program and the Subcommittee
on Global Change Research[National Oceanic and Atmospheric Administration,]),
157-166.
De
La Cruz-Orozco, M. E., G. Gaxiola-Castro, J. Garcia-Cordova, G. Friederich, F.
Chavez, J.Gomez-Valdes (2007) Presion parcial del bioxido de carbono (pCO2)
frente a Baja California., (Mexico,
Instituto National Ecological, Mexico, DF).
Fischer,
A., Ryan, J., Rienecker, E. (2007) Tidally-forced exchange between Elkhorn
Slough and Monterey Bay. IN Presentation (Ed.) EPOC. September, Leavenworth,
WA.
Osborn,
D. A., Silver, M. W., Castro, C. G., Bros, S. M. & Chavez, F. P. (2007) The
habitat of mesopelagic scyphomedusae in monterey bay, California. Deep-Sea
Research Part I-Oceanographic Research Papers, 54(8), 1241-1255.
Rago,
T., Michisaki, R. P., Marinovic, B., Blum, M. & Whitaker, K. (2007)
Physical, Nutrient, and Biological Measurements of Coastal Water off Central
California in June/July 2006. Report for Naval Postgraduate School (Monterey,
California).
Rago,
T., Michisaki, R. P., Marinovic, B., Blum, M. & Whitaker, K. (2007)
Physical, Nutrient, and Biological Measurements of Coastal Water off Central
California in October 2006. Report for Naval Postgraduate School (Monterey,
California).
Shulman,
I., Kindle, J., Martin, P., Derada, S., Doyle, J., Penta, B., Anderson, S.,
Chavez, F., Paduan, J. & Ramp, S. (2007) Modeling of upwelling/relaxation
events with the Navy Coastal Ocean Model. Journal of Geophysical
Research-Oceans, 112(C6).
Wankel,
S. D., Kendall, C., Pennington, J. T., Chavez, F. P. & Paytan, A. (2007)
Nitrification in the euphotic zone as evidenced by nitrate dual isotopic
composition: Observations from Monterey Bay, California. Global Biogeochemical
Cycles, 21(2), 13.
Barber,
R., Smith, R., Dugdale, R., Chai, F., Chao, Y., Chavez, F., O'Brien, J. &
Mooers, C. (2006) Coastal Upwelling Research Is Poised to Improve the
Management and Conservation of Fish Resources Dramatically. Ocean Science
Conference. Honolulu, Hawaii.
Behrenfeld,
M. J., Worthington, K., Sherrell, R. M., Chavez, F. P., Strutton, P., McPhaden,
M. & Shea, D. M. (2006) Controls on tropical Pacific Ocean productivity
revealed through nutrient stress diagnostics. Nature, 442(7106), 1025-1028.
Field,
D., Cayan, D. & Chavez, F. (2006) Secular warming in the California current
and North Pacific. California Cooperative Oceanic Fisheries Investigations
Reports, 47(92-108.
Johnson,
K. S., Coletti, L. J. & Chavez, F. P. (2006) Diel nitrate cycles observed
with in situ sensors predict monthly and annual new production. Deep-Sea
Research Part I-Oceanographic Research Papers, 53(3), 561-573.
McLaughlin,
K., Chavez, F. P., Pennington, J. T. & Paytan, A. (2006) A time series
investigation of the oxygen isotopic composition of dissolved inorganic
phosphate in Monterey Bay, California. Limnol. Oceanogr., 51(5)(2370–2379.
Paduan,
J. D., Kim, K. C., Cook, M. S. & Chavez, F. P. (2006) Calibration and
validation of direction-finding high-frequency radar ocean surface current
observations. IEEE Journal of Oceanic Engineering, 31(4), 862-875.
Pennington,
J. T., Mahoney, K. L., Kuwahara, V. S., Kolber, D. D., Calienes, R. &
Chavez, F. P. (2006) Primary production in the eastern tropical Pacific: A
review. Progress in Oceanography, 69(2-4), 285-317.
Peterson,
B., Emmett, R., Goericke, R., Venrick, E., Mantyla, A., Bograd, S. J., Schwing,
F. B., Ralston, S., Forney, K. A., Hewitt, R., Lo, N., Watson, W., Barlow, J.,
Lowry, M., Lavaniegos, B. E., Chavez, F., Sydeman, W. J., Hyrenbach, D., Bradley,
R. W., Warzybok, P., Hunter, K., Benson, S., Weise, M. & Harvey, J. (2006)
The state of the California current, 2005-2006: Warm in the North, cool in the
South. California Cooperative Oceanic Fisheries Investigations Reports,
47(30-74.
Rago,
T., Michisaki, R. P., Marinovic, B. & Whitaker, K. (2006) Physical,
Nutrient and Biological Measurements of Coastal Waters off Central California
in October 2005. Report for Naval Postgraduate School (Monterey, California).
Ryan,
J. P., Ueki, I., Chao, Y., Zhang, H. C., Polito, P. S. & Chavez, F. P.
(2006) Western Pacific modulation of large phytoplankton blooms in the central
and eastern equatorial Pacific. Journal of Geophysical Research-Biogeosciences,
111(G2), 14.
Buck,
K. R., Marin, R. & Chavez, F. P. (2005) Heterotrophic dinoflagellate fecal
pellet production: grazing of large, chain-forming diatoms during upwelling
events in Monterey Bay, California. Aquatic Microbial Ecology, 40(3), 293-298.
Chavez,
F. P. (2005) Chapter 16 Biological consequences of interannual to multidecadal
variability., in: A. Robinson & K. Brink (Eds) The Sea. (vol. 13)Cambridge,
Massachussetts, Harvard University Press), 643-679.
Croll,
D. A., Marinovic, B., Benson, S., Chavez, F. P., Black, N., Ternullo, R. &
Tershy, B. R. (2005) From wind to whales: trophic links in a coastal upwelling
system. Marine Ecology-Progress Series, 289(117-130.
Goericke,
R., Venrick, E., Mantyla, A., Bograd, S. J., Schwing, F. B., Huyer, A., Smith,
R. L., Wheeler, P. A., Hooff, R., Peterson, W. T., Chavez, F., Collins, C.,
Marinovic, B., Lo, N., Gaxiola-Castro, G., Durazo, R., Hyrenbach, K. D. &
Sydeman, W. J. (2005) The state of the California current, 2004-2005: Still
cool? California Cooperative Oceanic Fisheries Investigations Reports,
46(32-71.
Graybeal,
J., Bellingham, J. G. & Chavez, F. P. (2005) Data systems for ocean
observation programs. Sea Technology, 46(9), 23-+.
Hendricks,
M. B., Bender, M. L., Barnett, B. A., Strutton, P. & Chavez, F. P. (2005)
Triple oxygen isotope composition of dissolved O-2 in the equatorial Pacific: A
tracer of mixing, production, and respiration. Journal of Geophysical
Research-Oceans, 110(C12), 17.
Ramp,
S. R., Paduan, J. D., Shulman, I., Kindle, J., Bahr, F. L. & Chavez, F.
(2005) Observations of upwelling and relaxation events in the northern Monterey
Bay during August 2000. Journal of Geophysical Research-Oceans, 110(C7).
Ryan,
J. P., Chavez, F. P. & Bellingham, J. G. (2005) Physical-biological
coupling in Monterey Bay, California: topographic influences on phytoplankton
ecology. Marine Ecology-Progress Series, 287(23-32.
Ryan,
J. P., Dierssen, H. M., Kudela, R. M., Scholin, C. A., Johnson, K. S.,
Sullivan, J. M., Fischer, A. M., Rienecker, E. V., McEnaney, P. R. &
Chavez, F. P. (2005) Coastal ocean physics and red tides: an example from
Monterey Bay, California. Oceanography, 18(2), 246-255.
Chavez,
F. (2004) A Central California Ocean Observing System, CenCOOS. 2004 Ocean
Sciences Meeting. AGU Abstract.
Chavez,
F. P., Pennington, J. T., Michisaki, R. & Ryan, J. (2004) The Monterey Bay
Ocean Time-series and Observatory (MOTO) sheds light on multi-decadal
basin-scale fluctuations of anchovies and sardines. Ecosystem Observations,
Spring 2004), 20-21.
Chavez,
F. P., Pennington, J. T., Michisaki, R. & Ryan, J. P. (2004) The Monterey
Bay Ocean Time-Series and Observatory (MOTO) sheds light on multi-decadal
basin-scale fluctuations of anchovies and sardines. Report for Monterey Bay
National Marine Sanctuary.
Coale,
K. H., Johnson, K. S., Chavez, F. P., Buesseler, K. O., Barber, R. T.,
Brzezinski, M. A., Cochlan, W. P., Millero, F. J., Falkowski, P. G., Bauer, J.
E., Wanninkhof, R. H., Kudela, R. M., Altabet, M. A., Hales, B. E., Takahashi,
T., Landry, M. R., Bidigare, R. R., Wang, X. J., Chase, Z., Strutton, P. G., Friederich,
G. E., Gorbunov, M. Y., Lance, V. P., Hilting, A. K., Hiscock, M. R., Demarest,
M., Hiscock, W. T., Sullivan, K. F., Tanner, S. J., Gordon, R. M., Hunter, C.
N., Elrod, V. A., Fitzwater, S. E., Jones, J. L., Tozzi, S., Koblizek, M.,
Roberts, A. E., Herndon, J., Brewster, J., Ladizinsky, N., Smith, G., Cooper,
D., Timothy, D., Brown, S. L., Selph, K. E., Sheridan, C. C., Twining, B. S.
& Johnson, Z. I. (2004) Southern ocean iron enrichment experiment: Carbon
cycling in high- and low-Si waters. Science, 304(5669), 408-414.
Kudela,
R. M. & Chavez, F. P. (2004) The impact of coastal runoff on ocean color
during an El Niño year in Central California. Deep-Sea Research Part Ii-Topical
Studies in Oceanography, 51(10-11), 1173-1185.
Strutton,
P. G. & Chavez, F. P. (2004) Biological heating in the equatorial Pacific:
Observed variability and potential for real-time calculation. Journal of
Climate, 17(5), 1097-1109.
Strutton,
P. G., Chavez, F. P., Dugdale, R. C. & Hogue, V. (2004) Primary
productivity in the central equatorial Pacific (3 degrees S 130 degrees W)
during GasEx-2001. Journal of Geophysical Research-Oceans, 109(C8), 13.
Bac,
M. G., Buck, K. R., Chavez, F. P. & Brassell, S. C. (2003) Seasonal
variation in alkenones, bulk suspended POM, plankton and temperature in
Monterey Bay, California: implications for carbon cycling and climate
assessment. Organic Geochemistry, 34(6), 837-855.
Berelson,
W., McManus, J., Coale, K., Johnson, K. S., Burdidge, D., Kilgore, T.,
Colodner, D., Chavez, F. P., Kudela, R. & Boucher, J. (2003) A time series
of benthic flux measurements from Monterey Bay, California. Continental Shelf
Research, 23(457-481.
Chao,
Y., Li, Z. J., Kindle, J. C., Paduan, J. D. & Chavez, F. P. (2003) A
high-resolution surface vector wind product for coastal oceans: Blending
satellite scatterometer measurements with regional mesoscale atmospheric model
simulations. Geophysical Research Letters, 30(1), 1013.
Chavez,
F. P. (2003) A constant sea of change: The biological response to variability.
EOS Transactions, AGU Ocean Science Meeting Supplement.
Chavez,
F. P. (2003) A constant sea of change: The biological response to variability.
Eos Trans. AGU,, 84(52).
Chavez,
F. P., Ryan, J., Lluch-Cota, S. E. & Niquen, M. (2003) From anchovies to
sardines and back: Multidecadal change in the Pacific Ocean. Science,
299(5604), 217-221.
Chavez,
F. P., Ryan, J., Lluch-Cota, S. E. & Niquen, M. (2003) Sardine fishing in
the early 20th century - Response. Science, 300(5628), 2033-2033.
Collins,
C. A., Pennington, J. T., Castro, C. G., Rago, T. A. & Chavez, F. P. (2003)
The California Current system off Monterey, California: physical and biological
coupling. Deep-Sea Research Part Ii-Topical Studies in Oceanography, 50(14-16),
2389-2404.
Cosca,
C. E., Feely, R. A., Boutin, J., Etcheto, J., McPhaden, M. J., Chavez, F. P.
& Strutton, P. G. (2003) Seasonal and interannual CO2 fluxes for the
central and eastern equatorial Pacific Ocean as determined from fCO(2)-SST
relationships. Journal of Geophysical Research-Oceans, 108(C8), 10.
Fitzwater,
S. E., Johnson, K. S., Elrod, V. A., Ryan, J. P., Coletti, L. J., Tanner, S.
J., Gordon, R. M. & Chavez, F. P. (2003) Iron, nutrient and phytoplankton
biomass relationships in upwelled waters of the California coastal system.
Continental Shelf Research, 23(1523-1544.
Johnson,
K. S., Elrod, V. A., Fitzwater, S. E., Plant, J. N., Chavez, F. P., Tanner, S.
J., Gordon, R. M., Westphal, D. L., Perry, K. D., Wu, J. F. & Karl, D. M.
(2003) Surface ocean-lower atmosphere interactions in the Northeast Pacific
Ocean Gyre: Aerosols, iron, and the ecosystem response. Global Biogeochemical
Cycles, 17(2).
Paytan,
A., Cade-Menun, B. J., McLaughlin, K. & Faul, K. L. (2003) Selective
phosphorus regeneration of sinking marine particles: evidence from P-31-NMR.
Marine Chemistry, 82(1-2), 55-70.
Strutton,
P. G. & Chavez, F. P. (2003) Scales of Biological-Physical Coupling in the
Equatorial Pacific.Handbook of Scaling Methods in Aquatic Ecology: Measurement,
Analysis and Simulation., CRC Press, LLC).
Benson,
S. R., Croll, D. A., Marinovic, B. B., Chavez, F. P. & Harvey, J. T. (2002)
Changes in the cetacean assemblage of a coastal upwelling ecosystem during El
Niño 1997-98 and La Nina 1999. Progress in Oceanography, 54(1-4), 279-291.
Castro,
C. G., Baumgartner, T. R., Bograd, S., Castro, R., Chavez, F. P., Collins, C.
A., Durazo, R., Garcy'a, J., Gaxiola-Castro, G., Hayward, T., Huyer, A., Lynn,
R., Mascarenhas, A. S., Robert, M. R. D., Smith, R. L., Wheeler, P. A. &
Whitney, F. A. (2002) Introduction to 'The 1997-8 El Niño Atlas of
oceanographic conditions along the west coast of North America (23°N-50°N).
Progress in Oceanography, 54(501-508.
Castro,
C. G., Collins, C. A., Walz, P., Pennington, J. T., Michisaki, R. P.,
Friederich, G. & Chavez, F. P. (2002) Nutrient variability during El Niño
1997-98 in the California current system off central California. Progress in
Oceanography, 54(1-4), 171-184.
Chavez,
F. P., Collins, C. A., Huyer, A. & Mackas, D. L. (2002) El Niño along the
west coast of North America. Progress in Oceanography, 54(1-5.
Chavez,
F. P., Pennington, J. T., Castro, C. G., Ryan, J. P., Michisaki, R. P.,
Schlining, B., Walz, P., Buck, K. R., McFadyen, A. & Collins, C. A. (2002)
Biological and chemical consequences of the 1997-98 El Niño in central
California waters. Progress in Oceanography, 54(1-4), 205-232.
Collins,
C. A., Castro, C. G., Asanuma, H., Rago, T. A., Han, S. K., Durazo, R. &
Chavez, F. P. (2002) Changes in the hydrography of Central California waters
associated with the 1997-98 El Niño. Progress in Oceanography, 54(1-4),
129-147.
Elrod,
V. A., Johnson, K. S., Chavez, F. P., Fitzwater, S. E., Pennington, T., Buck,
K. R. & Walz, P. M. (2002) Iron in the MBARI Monterey Bay Time Series. 2002
Fall Meeting. AGU Abstract.
Friederich,
G. E., Walz, P. M., Burczynski, M. G. & Chavez, F. P. (2002) Inorganic
carbon in the central California upwelling system during the 1997-1999 El
Niño-La Nina event. Progress in Oceanography, 54(1-4), 185-203.
Hopcroft,
R. R., Clarke, C. & Chavez, F. P. (2002) Copepod communities in Monterey
Bay during the 1997-1999 El Niño and La Nina. Progress in Oceanography,
54(1-4), 251-264.
Jahnke,
R., Atkinson, L., Barth, J., Chavez, F. P., Daly, K., Edson, J., Franks, P.,
O'Donnell, J. & Schofield, O. (2002) Coastal ocean processes and
observatories: Advancing coastal research., Skidaway Institute of Oceanography.
Kindle,
J. C., Hodur, R. M., deRada, S., Paduan, J. D., Rosenfeld, L. K. & Chavez,
F. Q. (2002) A COAMPS (TM) reanalysis for the Eastern Pacific: Properties of
the diurnal sea breeze along the central California coast. Geophysical Research
Letters, 29(24).
Kudela,
R. M. & Chavez, F. P. (2002) Multi-platform remote sensing of new
production in central California during the 1997-1998 El Niño. Progress in
Oceanography, 54(1-4), 233-249.
Marinovic,
B., Croll, D. A., Gong, N., Benson, S. & Chavez, F. P. (2002) Effects of
the 1997-98 El Niño on zooplankton within the Monterey Bay coastal upwelling
system with emphasis on the euphausiid community. Progress in Oceanography,
54(265-277.
Marinovic,
B. B., Croll, D. A., Gong, N., Benson, S. R. & Chavez, F. P. (2002) Effects
of the 1997-1999 El Niño and La Nina events on zooplankton abundance and
euphausiid community composition within the Monterey Bay coastal upwelling
system. Progress in Oceanography, 54(1-4), 265-277.
Pennington,
J. T., Michisaki, R. P., Marin, R. & Chavez, F. P. (2002) Across the NE
Pacific in Spring, 2001: Physical, Chemical and Biological Measures on a
Mid-latitude Section. 2002 Ocean Sciences Meeting. AGU Abstract.
Pennington,
J. T., Stricker, S. A. & Young, C. M. (2002) Phylum Brachiopoda. Atlas of
marine invertebrate larvae., 441-461.
Ryan,
J. P., Chavez, F. P., Bellingham, J. G., Rienecker, E., Kudela, R., Woude, A.
V., Maffione, R. & Fischer, A. (2002) Environmental processes in the
Monterey Bay National Marine Sanctuary: Studies integrating AVIRIS and synoptic
in-situ sensing. Pasadena, CA.
Ryan,
J. P., Polito, P. S., Strutton, P. G. & Chavez, F. P. (2002) Unusual
large-scale phytoplankton blooms in the equatorial Pacific. Progress in
Oceanography, 55(263-285.
Schwarz,
J. N., Kowalczuk, P., Kaczmarek, S., Cota, G. F., Mitchell, B. G., Kahru, M.,
Chavez, F. P., Cunningham, A., McKee, D., Gege, P., Kishino, T., Phinney, D. A.
& Raine, R. (2002) Two models for absorption by coloured dissolved organic
matter (CDOM). Oceanologia, 44(2), 209-241.
Béjà,
O., Spudich, E. N., Spudich, J. L., Leclerc, M. & DeLong, E. F. (2001)
Proteorhodopsin phototrophy in the ocean. Nature, 411(6839), 786-789.
Castro,
C. G., Chavez, F. P. & Collins, C. (2001) The role of the California
Undercurrent in the export of denitrified waters from the eastern tropical
North Pacific. Global Biogeochemical Cycles, 21(819-830.
DeLong,
E. F. (2001) On the psychological instability of time series proponents. Acta
Retracta, 345(1-2001).
Hopcroft,
R. R., Roff, J. C. & Chavez, F. P. (2001) Size paradigms in copepod
communities: a re-examination. Hydrobiologia, 453(1-3), 133-141.
Johnson,
K. S., Chavez, F. P., Elrod, V. A., Fitzwater, S. E., Pennington, J. T., Buck,
K. R. & Walz, P. M. (2001) The annual cycle of iron and the biological
response in central California coastal waters. Geophysical Research Letters,
28(1,247-1,250.
Johnson,
K. S., Paull, C. K., Barry, J. P. & Chavez, F. P. (2001) A decadal record
of underflows from a coastal river into the deep sea. Geology, 29(11),
1,019-1,022.
Polito,
P. S., Ryan, J. P., Liu, W. T. & Chavez, F. P. (2001) Oceanic and
atmospheric anomalies of tropical instability waves. Geophysical Research
Letters, 28(11), 2,233-2,336.
Raskoff,
K. A. (2001) The ecology of the mesopelagic hydromedusae in Monterey Bay,
California. Ph.D. Dissertation. University of California at Los Angeles.
Rau,
G. H., Chavez, F. P. & Friederich, G. E. (2001) Plankton C-13/C-12
variations in Monterey Bay, California: evidence of non-diffusive inorganic
carbon uptake by phytoplankton in an upwelling environment. Deep-Sea Research
Part I-Oceanographic Research Papers, 48(1), 79-94.
Rau,
G. H., Ralston, S., Southon, J. R. & Chavez, F. P. (2001) Upwelling and the
condition and diet of juvenile rockfish: A study using C-14, C-13, and N-15
natural abundances. Limnology and Oceanography, 46(6), 1565-1570.
Silguero,
J. M. B. (2001) The seasonal abundance and vertical distribution of rocketship
siphonophores over a seven year period, including the impact of the 1997-1999
ENSO, and their metabolic demand and prey requirements. Ph.D. Dissertation,,
University of California at Santa Barbara.
Strutton,
P. G., Ryan, J. P. & Chavez, F. P. (2001) Enhanced chlorophyll associated
with tropical instability waves in the equatorial Pacific. Geophysical Research
Letters, 28(10), 2005-2008.
Suzuki,
M. T., Beja, O., Taylor, L. T. & DeLong, E. F. (2001) Phylogenetic analysis
of ribosomal RNA operons from uncultivated coastal marine bacterioplankton.
Environmental Microbiology, 3(5), 323-331.
Suzuki,
M. T., Preston, C. M., Chavez, F. P. & DeLong, E. F. (2001) Quantitative
mapping of bacterioplankton populations in seawater: field tests across an
upwelling plume in Monterey Bay. Aquatic Microbial Ecology, 24(2), 117-127.
Béjà,
O., Aravind, L., Koonin, E. V., Suzuki, M. T., Hadd, A., Nguyen, L. P.,
Jovanovich, S., Gates, C. M., Feldman, R. A., Spudich, J. L., Spudich, E. N.
& DeLong, E. F. (2000) Bacterial rhodopsin: Evidence for a new type of
phototrophy in the sea. Science, 289(5486), 1902-1906.
Béjà,
O., Suzuki, M. T., Koonin, E. V., Aravind, L., Hadd, A., Nguyen, L. P.,
Villacorta, R., Amjadi, M., Garrigues, C., Jovanovich, S. B., Feldman, R. A.
& DeLong, E. F. (2000) Construction and analysis of bacterial artificial
chromosome libraries from a marine microbial assemblage. Environmental
Microbiology, 2(5), 516-529.
Chavez,
F. P. & Collins, C. A. (2000) Corrigendum to "Studies of the
California Current System Part 2";
[Deep-Sea Research II 47 (5-6), 2000]. Deep Sea Research Part II:
Topical Studies in Oceanography, 47(1.
Chavez,
F. P. & Collins, C. A. (2000) Studies of the California current system part
2. Deep-Sea Research II, 47(5-6.
Chavez,
F. P. & Collins, C. A. (2000) Studies of the California current system:
Present, past and future. Deep-Sea Research II, 47(761-763.
Chavez,
F. P., Wright, D., Herlien, R., Kelley, M., Shane, F. & Strutton, P. G.
(2000) A device for protecting moored spectroradiometers from biofouling.
Journal of Oceanographic and Atmospheric Technology, 17(215-219.
Kudela,
R. M. & Chavez, F. P. (2000) Modeling the impact of the 1992 El Niño on new
production in Monterey Bay, California. Deep-Sea Research Part II: Topical
Studies in Oceanography, 47(1055-1076.
Olivieri,
R. A. & Chavez, F. P. (2000) A model of plankton dynamics for the coastal
upwelling system of Monterey Bay, California. Deep-Sea Research II,
47(1077-1106.
Pennington,
J. T. & Chavez, F. P. (2000) Seasonal fluctuations of temperature,
salinity, nitrate, chlorophyll and primary production at station H3/M1 over
1989-1996 in Monterey Bay, California. Deep-Sea Research II, 47(5-6), 947-973.
Suzuki,
M. T., Taylor, L. T. & DeLong, E. F. (2000) Quantitative analysis of
small-subunit rRNA genes in mixed microbial populations via 5 '-nuclease
assays. Applied and Environmental Microbiology, 66(11), 4605-4614.
Altabet,
M. A., Pilskaln, C., Thunell, R., Pride, C., Sigman, D., Chavez, F. &
Francois, R. (1999) The nitrogen isotope biogeochemistry of sinking particles
from the margin of the Eastern North Pacific. Deep-Sea Research Part
I-Oceanographic Research Papers, 46(4), 655-679.
Chavez,
F. P., Strutton, P. G., Friederich, G. E., Feely, R. A., Feldman, G. C., Foley,
D. G. & McPhaden, M. J. (1999) Biological and chemical response of the
Equatorial Pacific Ocean to the 1997-98 El Niño. Science, 286(2126-2131.
Johnson,
K. S., Chavez, F. P. & Friederich, G. E. (1999) Continental-shelf sediment
as a primary source of iron for coastal phytoplankton. Nature, 398(697-700.
Miller,
A. J., McWilliams, J. C., Schneider, N., Allen, J. S., Barth, J. A., Beardsley,
R. C., Chavez, F. P., Chereskin, T. K., Edwards, C. A., Haney, R. L., Kelly, K.
A., Kindle, J. C., Ly, L. N., Moisan, J. R., Noble, M. A., Niiler, P. P., Oey,
L. Y., Schwing, F. B., Shearman, R. K. & Swenson, M. S. (1999) Observing
and modeling the California Current System. EOS, 80(45), 533-539.
Pennington,
J. T., Tamburri, M. N. & Barry, J. P. (1999) Development, temperature
tolerance, and settlement preference of embryos and larvae of the articulate
brachiopod Laqueus californianus. Biological Bulletin, 196(3), 245-256.
Barber,
R. T., F P Chavez (1998) The Signature of El Niño and La Niña in Physical
Conditions and Anchovy Catch in the Coastal Upwelling. EOS Transactions,
American Geophysical Union, 1998 Fall Meeting.
Berger,
W. H. & Lange, C. B. (1998) Silica depletion in the thermocline of the
glacial North Pacific; corollaries and implications [Monograph] Topical studies
in oceanography; studies of the California current system; Part 1. IN F. P.
Chavez & C. A. Collins (Eds.).
Chavez,
F. & Collins, C. (1998) Studies of the California Current System. Deep Sea
Research Part II: Topical Studies in Oceanography, 45(
Chavez,
F. P. (1998) California Current System off Central California, 1997-8. EOS
Transactions, American Geophysical Union, Fall Meeting,.
Chavez,
F. P. & Collins, C. A. (1998) California current system - Part 1 - Preface.
Deep-Sea Research Part II-Topical Studies in Oceanography, 45(8-9), 1407-1409.
Chavez,
F. P., Strutton, P. G. & McPhaden, M. J. (1998) Biological-physical
coupling in the central equatorial Pacific during the onset of the 1997-98 El
Niño. Geophysical Research Letters, 25(19), 3543-3546.
Collins,
C. A., S. Bollens, F P Chavez, D Krynen, J Paduan, T A Rago C Szczechowski
(1998) Results of 1997 Hydrographic Measurements off Central California. 1998
Ocean Sciences Meeting, OS149., EOS Transactions, American Geophysical Union,.
Friederich,
G. E., F P Chavez, P G. Strutton and P M. Walz (1998) Bio-optical and Carbon
Dioxide Time Series from Moorings in the Equatorial Pacific during 1997-1998.
EOS Transactions, American Geophysical Union, 1998 Fall Meeting.
Hiromi,
A., Chavez, F., Collins, C., Michisaki, R. & Rago, T. (1998) Hydrography of
the California Current System off Central California. 1997-8 EOS Transactions.
American Geophysical Union, 1998 Fall Meeting.
Pennington,
J. T., Michisaki, R. P. & Chavez, F. P. (1998) The 1997-98 El Niño,
Chlorophyll and Primary Production: Spatial and Seasonal Effects in Central
California. 1998 Ocean Sciences Meeting. AGU Abstract.
Petruncio,
E. T., Rosenfeld, L. K. & Paduan, J. D. (1998) Observations of the internal
tide in Monterey Canyon. Journal of Physical Oceanography, 28(10), 1873-1903.
Rau,
G. H., Low, C., Pennington, J. T., Buck, K. R. & Chavez, F. P. (1998)
Suspended particulate nitrogen delta N-15 versus nitrate utilization:
observations in Monterey Bay, CA. Deep-Sea Research Part Ii-Topical Studies in
Oceanography, 45(8-9), 1603-1616.
Robison,
B. H., Reisenbichler, K. R., Sherlock, R. E., Silguero, J. M. B. & Chavez,
F. P. (1998) Seasonal abundance of the siphonophore, Nanomia bijuga , in Monterey Bay. Deep-Sea
Research II, 45(8-9), 1741-1751.
Sakamoto,
C. M., Millero, F. J., Yao, W., Friederich, G. E. & Chavez, F. P. (1998)
Surface seawater distributions of inorganic carbon and nutrients around the
Galapagos Islands: Results from the PlumEx experiment using automated chemical
mapping. Deep-Sea Research II, 45(1055-1071.
Service,
S. K., Rice, J. A. & Chavez, F. P. (1998) Relationship between physical and
biological variables during the upwelling period in Monterey Bay, CA. Deep-Sea
Research II, 45(1669-1685.
Silver,
M. W., Coale, S. L. & Chavez, F. P. (1998) Exploratory observations of
marine aggregates > 0.25 mm at sub-euphotic depths (40-400m): Implications
for midwater formation. Deep-Sea Research II, 45(1669-1685.
Silver,
M. W., Coale, S. L., Pilskaln, C. H. & Chavez, F. P. (1998) Exploratory
observations of marine aggregates at sub-euphotic depths. Deep-Sea Research
Part II-Topical Studies in Oceanography, 45(8-9), 1839-1861.
Brzezinski,
M. A., Phillips, D. R., Chavez, F. P., Friederich, G. E. & Dugdale, R. C.
(1997) Silica production in the Monterey, California, upwelling system.
Limnology and Oceanography, 42(8), 1694-1705.
Chavez,
F. P., Pennington, J. T., Herlien, R. A., Jannasch, H. W., Thurmond, G. D.
& Friederich, G. E. (1997) Moorings and drifters for real-time
interdisciplinary oceanography. Journal of Atmospheric and Oceanic Technology,
14(1199-1211.
Kudela,
R. M. & Chavez, F. P. (1997) Estimating new production from the quantum
yield of nitrate uptake. SPIE, 2963(471-476.
Kudela,
R. M., Cochlan, W. P. & Dugdale, R. C. (1997) Carbon and nitrogen uptake
response to light by phytoplankton during an upwelling event. Journal of
Plankton Research, 19(5), 609-630.
Morvillez,
T. (1997) Monitoring Temperature Variability using Acoustic Tomography along
the California Coast. Masters, Naval Postgraduate School.
Paduan,
J. D. & Cook, M. S. (1997) Mapping surface currents in Monterey Bay with
CODAR type HF radar. Oceanography, 10.
Paduan,
J. D., Cook, M. S. & Fernandez, D. M. (1997) Two-dimensional diurnal to
monthly period surface currents in Monterey Bay from CODAR-type HF radar. IEEE
International Geoscience and Remote Sensing Symposium. Singapore, IEEE.
Ramp,
S. R., Rosenfeld, L. K., Tisch, T. D. & Hicks, M. R. (1997) Moored
observations of the current and temperature structure over the continental
slope off central California. Part I: A
basic description of the variability. Journal of Geophysical Research,
102(22877-22902.
Scholin,
C. A., Miller, P. E., Buck, K. R., Chavez, F. P., Harris, P., Haydock, P.,
Howard, J. & Cangelosi, G. (1997) Detection and quantification of
Pseudo-nitzschia australis in cultured and natural populations using LSU
rRNA-targeted probes. Limnology and Oceanography.
Schwing,
F. B., Hayward, T. L., Sakuma, K. M., Murphree, T., Mascarenas, A. S.,
Castillo, S. I. L., Mantyla, A. W., Cummings, S. L., Chavez, F. P., Baltz, K.
& Ainley, D. G. (1997) The state of the California Current, 1996-1997:
Mixed signals from the tropics. California Cooperative Oceanic Fisheries
Investigations Reports, 38(22-47.
Smith,
M. A. (1997) Comparison of trajectories generated by the NOAA oil spill model
to trajectories produced using HF radar-derived surface currents in Monterey
Bay. M.S. Thesis, Naval Postgraduate School.
Vesecky,
J. F., Teague, C. C., Onstott, R. G., Daida, J. M., Hansen, P., Fernandez, D.,
Schnepf, N. & Fischer, K. (1997) Surface current response to land-sea
breeze circulation in Monterey Bay, California as observed by a new
multifrequency HF radar. IEEE Oceans 97.
Anbar,
A. D., Yung, Y. L. & Chavez, F. P. (1996) Methyl bromide: Ocean sources,
ocean sinks, and climate sensitivity. Global Biogeochemical Cycles, 10(1),
175-190.
Barber,
R. T., Sanderson, M. P., Lindley, S. T., Chai, F., Newton, J., Trees, C. C.,
Foley, D. G. & Chavez, F. P. (1996) Primary productivity and its regulation
in the equatorial Pacific during and following the 1991-1992 El Niño. Deep-Sea
Research II, 43(4-6), 933-969.
Buck,
K. R., Chavez, F. P. & Campbell, L. (1996) Basin-wide distributions of
living carbon components and the inverted trophic pyramid of the central gyre
of the North Atlantic Ocean, summer 1993. Aquatic Microbial Ecology,
10(283-298.
Chavez,
F. P. (1996) Forcing and biological impact of onset of the 1992 El Niño in
central California. Geophysical Research Letters, 23(3), 265-268.
Chavez,
F. P. (1996) Iron fertilization in the equatorial pacific. Nature, 383(496-501.
Chavez,
F. P., Buck, K. R., Service, S. K., Newton, J. & Barber, R. T. (1996)
Phytoplankton variability in the central and eastern tropical Pacific. Deep-Sea
Research II, 43(4-6), 835-870.
Chavez,
F. P. & Friederich, G. E. (1996) The role of primary production in the
carbon cycle of coastal and open ocean upwelling systems. Caribbean Journal of
Science.
Chavez,
F. P., Friederich, G. E., Dugdale, R. C. & Wilkerson, F. P. (1996) A study
of the role in the air-sea flux of CO2 during the spring 1995 MBL experiment
off Monterey Bay, California. EOS Transactions, American Geophysical Union,
1996 Ocean Sciences Meeting.
Chavez,
F. P., Pennington, J. T., O'Reilly, T. & Friederich, G. E. (1996) Scales of
biological variability and the fate of primary production in the coast Central
California ecosystem. EOS Transactions, American Geophysical Union, 1996 Ocean
Sciences Meeting.
Chavez,
F. P., Service, S. K. & Buttrey, S. E. (1996) Temperature-nitrate
relationships in the central and eastern tropical Pacific. Journal of
Geophysical Research, 101(C9), 20553-20563.
Coale,
K. H., Johnson, K. S., Fitzwater, S. E., Gordon, R. M., Tanner, S., Chavez, F.
P., Ferioli, L., Sakamoto, C. M., Rogers, P., Millero, F., Steinberg, P.,
Nightingale, P., Cooper, D., Cochlan, W. P., Landry, M. R., Constantinou, J.,
Rollwagen, G., Trasvina, A. & Kudela, R. M. (1996) A massive phytoplankton
bloom induced by an ecosystem-scale iron fertilization experiment in the
equatorial Pacific Ocean. Nature, 383(495-501.
Dugdale,
R. C., Friederich, G. E., Chavez, F. P., Pennington, J. T., Wilkerson, F. P.
& Hayden, T. P. (1996) Air-sea fluxes of CO2 in coastal upwelling: An
overview of the Monterey Bay CoOP experiment. EOS Transactions, American
Geophysical Union, 1996 Ocean Sciences Meeting.
Dugdale,
R. C., Friederich, G. E., Chavez, F. P., Pennington, J. T., Wilkerson, F. P.
& Hayden, T. P. (1996) Spatial distribution of new production on Monterey
Bay during CoOP95: Implications for CO2 air-sea flux. EOS Transactions,
American Geophysical Union, 1996 Ocean Sciences Meeting.
Friederich,
G. E., Chavez, F. P. & Dugdale, R. C. (1996) Inorganic carbon and nutrient
utilization in the central California upwelling system during the CoOP 95
experiment. EOS Transactions, American Geophysical Union, 1996 Ocean Sciences
Meeting.
Hayward,
T. L., Cummings, S. L., Cayan, D. R., Chavez, F. P., Lynn, R. J., Mantyla, A.
W., Niiler, P. P., Schwing, F. B., Veit, R. R. & Venrick, E. L. (1996) The
state of the California Current in 1995-96: Continuing declines in
macrozooplankton biomass during a period of nearly normal circulation.
California Cooperative Oceanic Fisheries Investigatins, Report, 37(22-37.
Kudela,
R. M. & Chavez, F. P. (1996) Bio-optical properties in relation to an algal
bloom caused by iron enrichment in the equatorial Pacific. Geophysical Research
Letters, 23(25), 3751-3754.
Olivieri,
R. A. (1996) Plankton dynamics and the fate of primary production in the
coastal upwelling ecosystem of Monterey Bay, CA. Masters Mooring, University of
California at Santa Cruz.
Paduan,
J. D. & Rosenfeld, L. K. (1996) Remotely sensed surface currents in
Monterey Bay from shore-based HF radar (Coastal Ocean Dynamics Application
Radar). Journal of Geophysical Research, 101(C9), 20669-20686.
Paytan,
M., Kastner, M. & Chavez, F. P. (1996) Glacial to interglacial fluctuations
in productivity in the equatorial Pacific as indicated by marine barite.
Science, 274(1355-1357.
Petruncio,
E. T. (1996) Observations and modeling of the internal tide in a submarine
canyon. Ph. D. Mooring, Naval Postgraduate School.
Pilskaln,
C. H., Paduan, J. B., Chavez, F. P., Anderson, R. Y. & Berelson, W. M.
(1996) Carbon export and regeneration in the coastal upwelling system of
Monterey Bay, central California. Journal of Marine Research, 54(1149-1178.
Rogers,
P., Chavez, F. P., Jannasch, H. W., Ferioli, L. J. & Sakamoto, C. M. (1996)
Drifting during IronEXII. EOS Transactions, American Geophysical Union, 1996
Ocean Sciences Meeting.
Sakamoto,
C. M., Friederich, G. E., Service, S. K. & Chavez, F. P. (1996) Development
of automated surface seawater nitrate mapping systems for use in open ocean and
coastal waters. Deep-Sea Research I, 43(11-12), 1763-1775.
Angel,
M. V., Baars, M. A., Barber, R. T., Chavez, F. P., Kastner, M., Leinen, M.,
Lutjeharms, J. R. E., Reverdin, G. & Shimmield, G. B. (1995) Group report:
How do open ocean upwelling systems operate as integrated physical, chemical,
and biological systems and influence the geological record?, in: C. P.
Summerhayes, K.-C. Emeis, M. V. Angel, R. L. Smith & B. Zeitzschel (Eds)
Upwelling in the ocean: Modern processes and ancient records. Chichester, John
Wiley & Sons), 193-220.
Chavez,
F. P. (1995) A comparison of ship and satellite chlorophyll from California and
Peru. Journal of Geophysical Research, 100(C12), 24855-24862.
Chavez,
F. P., Buck, K. R., Bidigare, R. R., Karl, D. M., Hebel, D., Latasa, M.,
Campbell, L. & Newton, J. (1995) On the chlorophyll a retention properties
of glass-fiber GF/F filters. Limnology and Oceanography, 40(2), 428-433.
Chavez,
F. P. & Smith, S. L. (1995) Biological and chemical consequences of open
ocean upwelling, in: C. P. Summerhayes, K.-C. Emeis, M. V. Angel, R. L. Smith
& B. Zeitzschel (Eds) Upwelling in the ocean: Modern processes and ancient
records. New York, John Wiley &
Sons), 149-169.
Chavez,
F. P. & Toggweiler, J. R. (1995) Physical estimates of global new
production: The upwelling contribution, in: C. P. Summerhayes, K.-C. Emeis, M.
V. Angel, R. L. Smith & B. Zeitzschel (Eds) Upwelling in the ocean: Modern
processes and ancient records. New York, John Wiley & Sons), 313-320.
Friederich,
G. E., Brewer, P. G., Herlien, R. A. & Chavez, F. P. (1995) Measurement of
sea surface partial pressure of CO 2
from a moored buoy. Deep-Sea Research I, 42(7), 1175-1186.
Lenarz,
W. H., Ventresca, D. A., Graham, W. M., Schwing, F. B. & Chavez, F. P.
(1995) Explorations of El Niño and associated biological population dynamics
off central California. California Cooperative Oceanic Fisheries
Investigations, Report, 36(106-119.
Melton,
D. C. (1995) Remote sensing and validation of surface currents from HF radar.
Masters Mooring, Naval Postgraduate School.
Paduan,
J. D., Petruncio, E. T., Barrick, D. E. & Lipa, B. J. (1995) Surface
currents within and offshore of Monterey Bay as mapped by a multiple-site HF
radar (CODAR) network. IEEE Fifth Working conference on Current Measurement.
IEEE.
Bates,
T. S., Kiene, R. P., Wolfe, G. V., Matrai, P. A., Chavez, F. P., Buck, K. R.,
Blomquist, B. W. & Cuhel, R. L. (1994) The cycling of sulfur in surface
seawater of the northeast Pacific. Journal of Geophysical Research, 99(C4),
7835-7843.
Buck,
K. R. & Chavez, F. P. (1994) Diatom aggregates from the open ocean. Journal
of Plankton Research, 16(10), 1449-1457.
Chavez,
F. P., Herlien, R. A. & Thurmond, G. D. (1994) OASIS - Acquisition system
for moorings/drifters: Developed for interdisciplinary science, with multiple
adaptable interfaces; tested on ATLAS moorings in Monterey Bay, California. Sea
technology, 35(51-59.
Cross,
P. S., Rosenfeld, L. K. & Wash, C. H. (1994) A comparison of modeled and
observed ocean mixed layer behavior in a sea breeze influenced coastal region.
EOS Transactions, American Geophysical Union, 1996 Ocean Sciences Meeting.
Dugdale,
R., Wilkerson, F., Halpern, D., Chavez, F. & Barber, R. (1994) Remote
sensing of seasonal and annual variation of equatorial new production: A model
for global estimates. Advances in Space Research, 14(1), 169-178.
Feely,
R. A., Wanninkhof, R., Cosca, C. E., McPhaden, M. J., Byrne, R. H., Millero, F.
J., Chavez, F. P., Clayton, T., Campbell, D. M. & Murphy, P. P. (1994) The
effect of tropical instability waves on CO 2
species distributions along the equator in the eastern equatorial
Pacific during the 1992 ENSO event. Geophysical Research Letters, 21(4),
277-280.
Foster,
M. D., Wash, C., Paduan, J. D. & Rosenfeld, L. K. (1994) Evolution of
diurnal surface winds and CODAR-derived surface currents for Monterey Bay. EOS
Transactions, American Geophysical Union, 1996 Ocean Sciences Meeting.
Friederich,
G. E. (1994) Sea surface pCO2 measurements in a coastal upwelling system. EOS
Transactions, American Geophysical Union, 1996 Ocean Sciences Meeting.
Friederich,
G. E., Sakamoto, C. M., , J. T. P. & Chavez, F. P. (1994) Global fluxes fo
carbon and its related substances in the coastal sea-ocean-atmosphere system.
Sapporo Japan.
Friederich,
G. E., Sakamoto, C. M., Pennington, J. T. & Chavez, F. P. (1994) On the
direction of the air-sea flux of CO 2 in
coastal upwelling systems. Sapporo Hokkaido, Japan, Japan National Committee
for the IGBP.
Jannasch,
H. W., Johnson, K. S. & Sakamoto, C. M. (1994) Continuous nitrate measurments
obtained by osmotically pumped in situ long-term analyzers. EOS Transactions,
American Geophysical Union, 1996 Ocean Sciences Meeting.
Jannasch,
H. W., Johnson, K. S. & Sakamoto, C. M. (1994) Submersible, ostmotically
pumped analyzers for continuous determination of nitrate in situ. Analytical
Chemistry, 66(20), 3352-3361.
Johnson,
K. S. & Jannasch, H. W. (1994) Analytical chemistry under the sea surface:
monitoring ocean chemistry in situ Naval
Research Reviews, XLVI(3), 4-12.
Martin,
J. H., Coale, K. H., Johnson, K. S., Fitzwater, S. E., Gordon, R. M., Tanner,
S. J., Hunter, C. N., Elrod, V. A., Nowicki, J. L., Coley, T. L., Barber, R.
T., Lindley, S., Watson, A. J., Van Scoy, K. A., Law, C. S., Liddicoat, M. I.,
Ling, R., Stanton, T., Stockel, J., Collins, C., Anderson, A., Bidigare, R. R.,
Ondrusek, M., Latasa, M., Millero, F. J., Lee, K., Yao, W., Zhang, J. Z.,
Friederich, G. E., Sakamoto, C. M., Chavez, F., Buck, K. R., Kolber, Z. S.,
Greene, R. M., Falkowski, P. G., Chisholm, S. W., Hoge, F., Swift, R., Yungel,
J., Turner, S., Nightingale, P., Hatton, A., Liss, P. & Tindale, N. W.
(1994) Testing the iron hypothesis in ecosystems of the equatorial Pacific
Ocean. Nature, 371(123-129.
Petruncio,
E. T., Paduan, J. D. & Rosenfeld, L. K. (1994) Characterization of tidal
currents in Monterey Bay from in-situ measurements. EOS Transactions, American
Geophysical Union, 1996 Ocean Sciences Meeting.
Rosenfeld,
L. K. & Institute., M. B. A. R. (1994) Hydrographic data collected in
Monterey Bay during 1 September 1988 to 16 December 1992, (Monterey, California, Monterey Bay Aquarium
Research Institute).
Chavez,
F., Herlien, R., Thurmond, G. & Wright, D. (1993) A novel ocean acquisition
system for interdisciplinary science (OASIS),
(WASHINGTON, DC ( ), MTS).
Chavez,
F. P., Pennington, J. T. & Buck, K. R. (1993) Temporal variability of
phytoplankton in a coastal central California upwelling ecosystem. EOS
Transactions, American Geophysical Union.
Chavez,
F. P., Pennington, J. T., Herlein, R., Thurmond, G., Sakamoto, C. & Buck,
K. R. (1993) Forcing and biological impact of the 1992 El Niño in central
California. Oceanography Society, Third Scientific Meeting, Program of
Abstracts. Seattle, WA.
Cross,
P. S. (1993) A comparison of Modeled and observed ocean mixed layer behavior in
a sea breez influenced coastal region. Masters, Naval Postgraduate School.
Foster,
M. D. (1993) Evolution of diurnal surface winds and surface currents for
Monterey Bay, 1993. Masters Mooring, Naval Postgraduate School.
Friederich,
G. E., Brewer, P. G. & Herlein, R. A. (1993) Measurement of carbon dioxide
partial pressure (pCO2) at the sea surface on a moored buoy. Oceanographic
Society, Third Scientific Meeting, Program of Abstracts. Seattle, WA.
Herlien,
R. A., Pennington, J. T., Thurmond, G. & Chavez, F. P. (1993) An Ocean
Acquisition System for Interdisciplinary Science (OASIS). EOS Transactions,
American Geophysical Union, 1996 Ocean Sciences Meeting.
Jannasch,
H. W., Friederich, G. E., Sakamoto, C. M. & Johnson, K. S. (1993) The MBARI
chemical instrumentation program. MarChem 1993 Workshop on Marine Chemistry.
Steamboat Springs, CO.
Jannasch,
H. W. & Johnson, K. S. (1993) Long-term in situ osmotically pumped nitrate
analyzers. Oceanographic Society, Third Scientific Meeting, Program of
Abstracts. Seattle, WA.
Olivieri,
R. A., Cohen, A. & Chavez, F. P. (1993) An ecosystem model of Monterey Bay,
California, in: V. Christensen & D. Pauly (Eds) Trophic models of aquatic
ecosystems. Manila, Philippines, ICLARM Conference Proceedings), 315-322.
Pennington,
J. T. & Chavez, F. P. (1993) Pelagic barnacles: distribution of larvae and
recruitment to coastal moorings. EOS Transactions, American Geophysical Union,
1996 Ocean Sciences Meeting.
Petruncio,
E. T. (1993) Characterization of tidal currents in Monterey Bay from remote and
in situ measurements. Masters, Naval Postgraduate School.
Pilskaln,
C. H., Paduan, J. B., Chavez, F. P., Pennington, J. T. & Anderson, R. Y.
(1993) Carbon cycling in the coastal upwelling region of the Monterey Bay,
central California. Oceanography Society, Third Scientific Meeting, Program of
Abstracts. Seattle, WA.
Robison,
B. H. (1993) New technologies for sanctuary research. Oceanus, 36(3), 75-80.
Rosenfeld,
L., K.,, Hatcher, G., Anderson, T., Roughgarden, J. & Shkedy, Y. (1993)
Upwelling fronts and barnacle recruitment off central California. Eastern
Pacific Ocean Conference, 1993.
van
den Bosch, J., Davis, C. M. & Rhea, W. (1993) Atomospheric correction of
AVIRIS data of Monterey Bay contaminated by thin cirrus clouds. Report for NASA
Technical Report.
Buck,
K. R., Uttal-Cooke, L., Pilskaln, C. H., Roelke, D. L., Villac, M. C., Fryxell,
G. A., Cifuentes, L. & Chavez, F. P. (1992) Autecology of the diatom
Pseudonitzschia australis, a domoic acid producer, from Monterey Bay,
California. Marine Ecology Progress Series, 84(293-302.
Chavez,
F. P., Herlien, R., Thurmond, G., Wright, D. & Pennington, J. T. (1992)
Real-time mooring systems for interdisciplinary oceanographic research.
Autonomous Bio-Optical Ocean Observing Systems, Scientific Symposium. Monterey,
CA.
Dugdale,
R. C., Wilkerson, F. P., Barber, R. T. & Chavez, F. P. (1992) Estimating
new production in the equatorial Pacific Ocean at 150øW. Journal of Geophysical
Research, 97(C1), 681-686.
Eppley,
R. W., Chavez, F. P. & Barber, R. T. (1992) Standing stocks of particulate
carbon and nitrogen in the equatorial Pacific at 150øW. Journal of Geophysical
Research, 97(C1), 655-661.
Fiedler,
P. C., Chavez, F. P., Behringer, D. W. & Reilly, S. B. (1992) Physical and
biological effect of Los Ni¤os in the eastern tropical Pacific, 1986-1989.
Deep-Sea Research, 39(2), 199-219.
Hicks,
M. R. (1992) Alongshore sub-thermocline current variability in the central
California Current System. Masters Mooring, Naval Postgraduate School.
Jannasch,
H. W., Johnson, K. S. & Sakamoto, C. M. (1992) Long-term in situ nitrate
analyzers using osmotic pumps. Autonomous Bio=optical ocean observing systems.
Post,
W. M., Chavez, F. P., Mulholland, P. J., Pastor, J., Peng, T.-H., Prentice, K.
& Webb III, T. (1992) Climatic feedbacks in the global carbon cycle, in: D.
A. Dunnette & R. J. O'brien (Eds) The science of global change: the impact
of humans on the environment. Washington, D.C., American Chemical Society),
392-412.
Barber,
R. T. & Chavez, F. P. (1991) Regulation of primary productivity rate in the
equatorial Pacific Ocean. Limnology and Oceanography, 36(8), 1803-1815.
Buck,
K. R., Chavez, F. P. & Thomsen, H. A. (1991) Choanoflagellates of the
central California waters: Taxonomy, morphology and species assemblages.
Ophelia, 33(3), 179-186.
Chavez,
F. P., Barber, R. T., Kosro, P. M., Huyer, A., Ramp, S. R., Stanton, T. P.
& Mendiola, B. R. d. (1991) Horizontal transport and the distribution of
nutrients in the coastal transition zone off Northern California: Effects on
primary production, phytoplankton biomass and species composition. Journal of
Geophysical Research, 96(C8), 14833-14848.
Chavez,
F. P. & Brusca, R. C. (1991) The Galapagos Islands and their relation to
oceanographic processes in the tropical Pacific, in: M. J. James (Ed.)
Galapagos marine invertebrates. New York, Plenum Press), 9-33.
Chavez,
F. P., Buck, K. R., Coale, K. H., Martin, J. H., DiTullio, G. R., Welschmeyer,
N. A., Jacobson, A. C. & Barber, R. T. (1991) Growth rates, grazing,
sinking, and iron limitation of equatorial Pacific phytoplankton. Limnology and
Oceanography, 36(8), 1816-1833.
Chavez,
F. P., Buck, K. R., Pilskaln, C. H., Downs, J. N., Welschmeyer, N. A.,
Olivieri, R. A., Codispoti, A., Cohen, A. & Dugdale, R. C. (1991) On the
relationships between primary production, food web structure, new production
and particulate flux. Oceanography Society, Second Scientific Meeting, Program
of Abstracts.
Chavez,
F. P., Jannasch, H. W., Johnson, K. S., Sakamoto, C. M., Friederich, G. E.,
Thurmond, G. D., Herlien, R. A. & Codispoti, L. A. (1991) The MBARI program
for obtaining real-time measurements in Monterey Bay. Honolulu, IEEE.
Fiedler,
P. C., Philbrick, V. & Chavez, F. P. (1991) Oceanic upwelling and
productivity in the eastern tropical Pacific. Limnology and Oceanography,
36(8), 1834-1850.
Huyer,
A., Kosro, P. M., Fleischbein, J., Ramp, S. R., Stanton, T., Washburn, L.,
Chavez, F. P., Cowles, T. J., Pierce, S. D. & Smith, R. L. (1991) Currents
and water masses of the coastal transition zone off Northern California, June
to August 1988. Journal of Geophysical Research, 96(C8), 14809-14831.
Kosro,
P. M., Huyer, A., Ramp, S. R., Smith, R. L., Chavez, F. P., Cowles, T. J.,
Abbott, M. R., Strub, P. T., Barber, R. T., Jessen, P. & Small, L. F.
(1991) The structure of the transition zone between coastal waters and the open
ocean off Northern California, winter and spring 1987. Journal of Geophysical
Research, 96(C8), 14707-14730.
Pilskaln,
C. H., Chavez, F. P., Murphy, K. M., Whaling, P. J., Anderson, R. Y.,
Pillsbury, R. D. & Still, R. (1991) Seasonal particulate flux in Monterey
Bay, California: Coupling of primary production and organic carbon export in a
coastal upwelling zone. Oceanography Society, Second Scientific Meeting,
Program of Abstracts.
Pilskaln,
C. H., Chavez, R. F., Pillsbury, R. D. & Still, R. (1991) Timeseries
measurements of primary production, deep-water carbon fluxes and current flow
in Monterey Bay, California. Eastern Pacific Ocean Conference 1991, Program of
Abstracts.
Chavez,
F. P. (1990) Primary production in Monterey Bay, California: Rates and Fates.
Western Society of Naturalists, 71st annual meeting. U.S.A.
Chavez,
F. P., Buck, K. R. & Barber, R. T. (1990) Phytoplankton taxa in relation to
primary production in the equatorial Pacific. Deep-Sea Research, 37(11),
1733-1752.
Chavez,
F. P., Thurmond, G., Pearce, A., Hayes, S. P. & Milburn, H. (1990) Physical
and biological coupling in Monterey Bay and contiguous waters of the California
Current. EOS Transactions, American Geophysical Union.
Chavez,
F. P. (1989) Size distribution of phytoplankton in the central and eastern
tropical Pacific. Global Biogeochemical Cycles, 3(1), 27-35.
Chavez,
F. P., Barber, R. T. & Sanderson, M. P. (1989) The potential primary
production of the Peruvian upwelling ecosystem, 1953-1984, in: D. Pauly, P.
Muck, J. Mendo & I. Tsukayama (Eds) The Peruvian upwelling ecosystem:
Dynamics and interactions. Manila, Philippines, International Center for Living
Aquatic Resources Management), 50-63.
Chavez,
F. P. (1987) Ocean variability and phytoplankton community structure. Duke
University.
Chavez,
F. P. & Barber, R. T. (1987) An estimate of new production in the
equatorial Pacific. Deep-Sea Research, 34(7), 1229-1243.
Barber,
R. T. & Chavez, F. P. (1986) Ocean variability in relation to living
resources during the 1982-83 El Niño. Nature, 319(6051), 279-285.
Barber,
R. T., Kogelschatz, J. E. & Chavez, F. P. (1985) Origin of the biological
anomalies during the 1982/83 El Niño. California Cooperative Fisheries
Investigation Reports, 26(65-71.
Chavez,
F. P. & Barber, R. T. (1985) Plankton production during El Niño.
International Conference on the TOGA Scientific Programme. Geneva, World
Climate Research Publications, World Meteorological Organization.
Chavez,
F. P., Barber, R. T. & Soldi S., H. (1984) Propagated temperature changes
during onset and recovery of the 1982-83 El Niño. Nature, 309(5963), 47-49.
Barber,
R. T. & Chavez, F. P. (1983) Biological consequences of El Niño. Science,
22), 1203-1210.
Chavez,
F. P., Sevadjian, J., Wahl, C., Friederich, J., Tougher, B., Fong, M. &
Friederich, G. Measurements of pCO2 and pH from an autonomous surface vessel in
a coastal upwelling system. Submitted to Deep-Sea Research.
Thomsen,
P. F., Kielgast, J., Iversen, L. L. n., Møller, P. R., Rasmussen, M. &
Willerslev, E. Detection of a Diverse Marine Fish Fauna Using Environmental DNA
from Seawater Samples. Plos One, 7(8), e41732.